libStatGen Software  1
PosList.h
1 /*
2  * Copyright (C) 2011 Regents of the University of Michigan
3  *
4  * This program is free software: you can redistribute it and/or modify
5  * it under the terms of the GNU General Public License as published by
6  * the Free Software Foundation, either version 3 of the License, or
7  * (at your option) any later version.
8  *
9  * This program is distributed in the hope that it will be useful,
10  * but WITHOUT ANY WARRANTY; without even the implied warranty of
11  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
12  * GNU General Public License for more details.
13  *
14  * You should have received a copy of the GNU General Public License
15  * along with this program. If not, see <http://www.gnu.org/licenses/>.
16  */
17 
18 #ifndef __POSLIST_H__
19 #define __POSLIST_H__
20 
21 #include <vector>
22 
23 /// Store refID/position, but does not store values < 0.
24 class PosList
25 {
26 public:
27  /// Constructor
28  PosList();
29 
30  /// Reserves space for numRefs reference ids and numPositions for each id.
31  PosList(int numRefs, int numPositions);
32 
33  /// Destructor
34  virtual ~PosList();
35 
36  /// Add the specified reference id/position (negative values will not be
37  /// added).
38  void addPosition(int refID, int refPosition);
39 
40  /// Return whether or not this list contains the specified reference ID
41  /// and position (negative values will automatically return false).
42  bool hasPosition(int refID, int refPosition);
43 
44 protected:
45  PosList(const PosList& p);
46 
47  void initVars();
48 
49  // 2-D vector.
50  // indexed by [referenceID][position].
51  std::vector < std::vector<bool> > myPosList;
52 
53  int myNumRefs;
54  int myNumPos;
55 };
56 
57 
58 #endif
Store refID/position, but does not store values < 0.
Definition: PosList.h:25
bool hasPosition(int refID, int refPosition)
Return whether or not this list contains the specified reference ID and position (negative values wil...
Definition: PosList.cpp:81
virtual ~PosList()
Destructor.
Definition: PosList.cpp:36
PosList()
Constructor.
Definition: PosList.cpp:21
void addPosition(int refID, int refPosition)
Add the specified reference id/position (negative values will not be added).
Definition: PosList.cpp:42