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unsigned char | refBase:4 |
| "XACMGRSVTWYHKDBN"[ref_base] gives the reference base
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unsigned char | recordType:4 |
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unsigned int | offset |
| offset of this record from the previous one, in bases
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unsigned | depth:24 |
| log10 minimum likelihood * 10 and the number of mapped reads
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unsigned | minLLK:8 |
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unsigned char | mapQuality |
| root mean squared maximum mapping quality for overlapping reads
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union { |
unsigned char lk [10] |
| log10 likelihood ratio * 10 for genotypes AA, AC, AG, AT, CC, CG, CT, GG, GT, TT
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glfIndel indel |
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}; | |
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Definition at line 42 of file glfHandler.h.
The documentation for this struct was generated from the following files: