@name R-jointseg-1.0.2_1
@portname R-jointseg
@portepoch 0
@portversion 1.0.2
@portrevision 1
@archs x86_64
@pkgdep R-acnr-1.0.0_1
@pkgdep R-DNAcopy-1.76.0_1
@pkgdep R-matrixStats-1.3.0_1
@pkgdep R-CRAN-recommended-1.0.0_1
@pkgdep R-4.4.0_1
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/CITATION
@comment MD5:27245ae4f9efc48f98fb520cb0cb7999
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/DESCRIPTION
@comment MD5:5aa8fc0cd36e3379d6772f0c328d9931
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/INDEX
@comment MD5:00d63321ffafe60273067b7da4a8132c
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/Meta/Rd.rds
@comment MD5:7ab076bc2583f8e3053c95b8f59bf947
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/Meta/features.rds
@comment MD5:e963a2bc2c214e5438604d30759e805b
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/Meta/hsearch.rds
@comment MD5:c9273c8f42987be0985d1040086f87dd
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/Meta/links.rds
@comment MD5:312117841e06aaa9d2b76c83bb1f9b05
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/Meta/nsInfo.rds
@comment MD5:b76b2b17f5fdb1babadbbcf409c3dc9c
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/Meta/package.rds
@comment MD5:f74f9394d23e2cc7f809dfbf509c97a9
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/Meta/vignette.rds
@comment MD5:eb23eb6ce479bd9a5b4e038e906e15ac
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/NAMESPACE
@comment MD5:df06ed7b61c5ae0468472fad8dcf7c8a
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/NEWS.md
@comment MD5:645c4ea7cd6472a8b1e3210a337ddaef
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/R/jointseg
@comment MD5:d6c68f1fe41ced6e98a766a3757313da
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/R/jointseg.rdb
@comment MD5:2b83fb50447b744a2fad19b4de37ab4b
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/R/jointseg.rdx
@comment MD5:fbd0e39b9b90bbbd54522507b7d407be
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/doc/PSSeg.R
@comment MD5:0d6a071139f0959764d83888a709015d
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/doc/PSSeg.Rmd
@comment MD5:358d27acb4b501c5bd1ef81123c4a99c
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/doc/PSSeg.html
@comment MD5:f89695ea5f60bf3d47e55742a925a1cf
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/doc/dataGeneration.R
@comment MD5:bc274366df0db68a5d3a7476bddd2fc4
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/doc/dataGeneration.Rmd
@comment MD5:d35068dd0eac12030a858b60bcec7df9
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/doc/dataGeneration.html
@comment MD5:f27eeccfc2db7bf79b572b14df61a44f
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/doc/index.html
@comment MD5:6727f4b671d5eb74eed67b022f75e520
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE11976/00.setup.R
@comment MD5:5eb60346221e1a0e64be593e79edd3b9
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE11976/01.createDataSets.R
@comment MD5:33d3f122044f34134f4e42a85590b9db
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE11976/02a.RBS+DP.R
@comment MD5:ddbcea24ceb0a98cb7551fd9bf7e82b2
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE11976/02c.cghseg.R
@comment MD5:cf6bd3e00445b5824e24342bcea7e40d
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE11976/02d.CBS.R
@comment MD5:e68189612a9a966abe638754b2fbd3c8
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE11976/02e.PSCBS.R
@comment MD5:a5246bad3ee210334ba426574e4211cb
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE11976/02f.GFLars.R
@comment MD5:a76375a894f9e71f4e4044478837d2a5
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE11976/03.perf.R
@comment MD5:bc237341fb1eaaccd4760a239e8a4625
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE11976/04.pAUC.R
@comment MD5:861cc155c17add871b2238abeb018513
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE11976/05.pAUCcurves.R
@comment MD5:937ef4eeded0f01ed2a708f0ebd61ec6
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE11976/06.pAUCtable.R
@comment MD5:0fe3b1fd9b2105d0f4ca6724f5aa6abd
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE11976/SnrForCaughtAndMissedBkp.R
@comment MD5:b6dd68cae4936541810e0b9ccf13d7f9
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE11976/myImagePlot.R
@comment MD5:61151018c12a8d686a05aa90a7c55583
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE29172/00.setup.R
@comment MD5:9229147abda9e370fd4652ae303a06ac
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE29172/01.createDataSets.R
@comment MD5:7111c0126bf396d292aa09b365596841
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE29172/02a.RBS+DP.R
@comment MD5:b5b42a666caa4de85708e4f6b0f9defd
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE29172/02c.cghseg.R
@comment MD5:0dbd8a717d0797f6df37ec38ba925509
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE29172/02d.CBS.R
@comment MD5:7e8577834e4f6af6da3c391236b4eba2
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE29172/02e.PSCBS.R
@comment MD5:382d8715832da483caa2be0c2ac47642
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE29172/02f.GFLars.R
@comment MD5:3a791f9ebd40c2f50b5aa419b6552033
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE29172/03.perf.R
@comment MD5:cd644ec2205637d7e0ab7f3ddd45ca41
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE29172/04.pAUC.R
@comment MD5:c2c1d7e91efce9604306c5acba513983
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE29172/05.pAUCcurves.R
@comment MD5:27e2a5e6edcc91427642d2e6003483b2
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE29172/06.pAUCtable.R
@comment MD5:0fe3b1fd9b2105d0f4ca6724f5aa6abd
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE29172/SnrForCaughtAndMissedBkp.R
@comment MD5:29a840b607f753a3e124aa0ce369778a
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/eval/GSE29172/myImagePlot.R
@comment MD5:5c7a5762381a653299c02ca5eb558633
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/figures/SNR.R
@comment MD5:2e9065ed5f629521a95a08bce1d26320
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/figures/cnProfiles.tex
@comment MD5:b8a6775e2f72a16b02d7da6d0e0e04e7
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/figures/copyNumberData.R
@comment MD5:81a1fa9dec6517692ed46f83b972ec9f
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/figures/evalTPFP.R
@comment MD5:5e54c339510c0000d7aeca217975a307
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/help/AnIndex
@comment MD5:7bb4b5ffd132e933b1049fcfa1b95a26
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/help/aliases.rds
@comment MD5:8cfe3ff76110c39115e8f46a26ca4b81
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/help/jointseg.rdb
@comment MD5:084e3e5d4736f8ce51cbf12e8fb11a00
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/help/jointseg.rdx
@comment MD5:fb6cd19bce02426a52d717a69da6fd4e
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/help/paths.rds
@comment MD5:96043ebad43f282d89c6badded9eefe1
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/html/00Index.html
@comment MD5:76cd4d613797c903fda814aaba891aa7
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/html/R.css
@comment MD5:8b9362669af13540a86a3ac6cf22f99d
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/libs/jointseg.so
@comment MD5:71c78842f6a70b781ac5d149ef3518e5
@comment binary:1
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/otherMethods/ASCAT/doASCAT.R
@comment MD5:7cf0fc6ab2f01558f0f00993f4dad7fb
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/otherMethods/ASCAT/downloadASCAT.R
@comment MD5:a71fee701471285b9cdf89c6ed34c310
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/otherMethods/ASCAT/predictGG.R
@comment MD5:4eda24bfb0f64092c8ace0186457120a
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/otherMethods/ASCAT/runASCAT.R
@comment MD5:0da62f9d3fa63573f4afa3e92807a0bf
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/otherMethods/CnaStruct/doCnaStruct.R
@comment MD5:f0364b90725f6b74a587d5d32adc26c0
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/otherMethods/PELT/doPelt.R
@comment MD5:450d0e4ddc2da90c980019c06b9d3fa7
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/otherMethods/PELT/doPelt.Rnw
@comment MD5:805f60af19e84ecc88fe039767087cea
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/otherMethods/PELT/jointSeg.bib
@comment MD5:9706ccf72df147e67f45f053ead9c813
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/otherMethods/PSCN/doPSCN.R
@comment MD5:4fc133e2a41ba60fe7bd71d04389ddec
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/syntheticProfiles/customRegionProba.R
@comment MD5:576e5c1062b0f72c0f63862d2d833144
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/syntheticProfiles/firestorm.R
@comment MD5:141f73950466990ba59318c52d407f89
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/syntheticProfiles/sawtooth.R
@comment MD5:1d3eb0d57a4734817a83e642b567e6c7
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/tests/testthat/test_getCopyNumberDataByResampling.R
@comment MD5:10284274d2505ac565ec6391d67c17c9
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/tests/testthat/test_jointSeg.R
@comment MD5:72216089947137fc6c5f90b08e3d07a4
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/tests/testthat/test_prunedDPA.R
@comment MD5:170286795d5965286fca87614b6c0ae8
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/tests/testthat.R
@comment MD5:76dfff03c96ae29920aeb7aebfb9ad2f
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/time/00.setup.R
@comment MD5:750d136d3be4c6edb19abe3bad594050
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/time/R/00.setup.R
@comment MD5:750d136d3be4c6edb19abe3bad594050
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/time/R/01.createDataSets.R
@comment MD5:3dde4bdfb649545b2d14c150500cb37e
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/time/R/02a.RBS+DP.R
@comment MD5:9cf527e7c9c9ea19533979d00fc88d4b
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/time/R/02b.PSCN.R
@comment MD5:6d2073cfb4aa9bbdc2a3adfb28581f04
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/time/R/02c.cghseg.R
@comment MD5:8464e7b69446a2c0d1c6e279fcbf794f
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/time/R/02d.CBS.R
@comment MD5:2d1785c7a8f4d4647fa303eb84da4892
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/time/R/02e.PSCBS.R
@comment MD5:2637f32c2fee9f515c648dd08bfbe472
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/time/R/02f.GFLars.R
@comment MD5:06d28fd63ba28809f5e3e3bf7cf8ad98
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/time/R/02g.CnaStruct.R
@comment MD5:0e1f1a9c8aba26603074e252fe63d213
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/time/R/02i.DPSeg2d.R
@comment MD5:75347a197bf569c823241506cab46de9
@comment binary:0
opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/jointseg/time/R/Script.R
@comment MD5:793f39d6a5c8b1690ddf032e7e8c8b1b
@comment binary:0
@ignore
+COMMENT
@ignore
+CONTENTS
@ignore
+DESC
@ignore
+PORTFILE
@ignore
+STATE
@cxx_stdlib libc++
@cxx_stdlib_overridden 0
