Last updated on 2025-11-08 03:49:07 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.93 | 258.73 | 271.66 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.06 | 229.20 | 239.26 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 335.72 | 367.72 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 187.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.18 | 260.60 | 275.78 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.44 | 269.38 | 284.82 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 186.00 | 198.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 12.00 | 191.00 | 203.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/142s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.596, system: 0.043, elapsed: 2.391 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.523, system: 0.125, elapsed: 13.282 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.015, elapsed: 0.297 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.970, system: 0.222, elapsed: 4.985 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.007, elapsed: 0.245 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.027, system: 0.437, elapsed: 22.043 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.722, system: 0.064, elapsed: 2.437 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.767, system: 0.306, elapsed: 14.934 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.016, elapsed: 0.293 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.249, system: 0.302, elapsed: 6.754 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.008, elapsed: 0.281 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.650, system: 0.728, elapsed: 25.478 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.858, system: 0.090, elapsed: 2.799 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.782, system: 0.312, elapsed: 14.894 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.014, elapsed: 0.591 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.205, system: 0.283, elapsed: 11.763 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.009, elapsed: 0.479 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.322, system: 0.265, elapsed: 2.285 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.201, system: 1.007, elapsed: 34.326 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.768, system: 0.089, elapsed: 4.903 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.723, system: 0.237, elapsed: 20.002 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.014, elapsed: 0.474 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.947, system: 0.183, elapsed: 7.151 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.004, elapsed: 0.272 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.927, system: 0.557, elapsed: 18.831 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.415, system: 1.126, elapsed: 53.242 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/139s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.733, system: 0.072, elapsed: 3.099 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.744, system: 0.239, elapsed: 17.265 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.019, elapsed: 0.291 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.818, system: 0.271, elapsed: 5.348 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.012, elapsed: 0.220 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.224, system: 0.647, elapsed: 27.089 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.776, system: 0.083, elapsed: 2.351 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.783, system: 0.341, elapsed: 14.460 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.018, elapsed: 0.362 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.110, system: 0.307, elapsed: 6.470 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.008, elapsed: 0.255 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.608, system: 0.809, elapsed: 24.734 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.713, system: 0.041, elapsed: 2.784 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.547, system: 0.121, elapsed: 19.003 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.012, elapsed: 0.368 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.834, system: 0.205, elapsed: 7.360 seconds]
Computing values for grid cells...
... done. [user: 0.193, system: 0.016, elapsed: 0.446 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.137, system: 0.260, elapsed: 1.230 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.254, system: 0.692, elapsed: 32.484 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.586, system: 0.042, elapsed: 2.251 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.478, system: 0.082, elapsed: 16.960 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.012, elapsed: 0.331 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.757, system: 0.171, elapsed: 6.004 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.004, elapsed: 0.320 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.615, system: 0.474, elapsed: 19.593 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.475, system: 0.813, elapsed: 46.534 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64