Last updated on 2025-07-17 09:50:55 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.82 | 256.19 | 269.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.93 | 206.19 | 217.12 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.22 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 383.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.45 | 273.53 | 287.98 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.61 | 277.85 | 291.46 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 174.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 182.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 161.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 233.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/117s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.495, system: 0.046, elapsed: 1.760 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.960, system: 0.106, elapsed: 12.802 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.013, elapsed: 0.365 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.663, system: 0.188, elapsed: 6.163 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.299 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.011, system: 0.378, elapsed: 22.113 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.476, system: 0.032, elapsed: 2.557 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.986, system: 0.078, elapsed: 15.216 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.013, elapsed: 0.327 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.671, system: 0.160, elapsed: 6.001 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.285 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.034, system: 0.306, elapsed: 25.390 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.525, system: 0.032, elapsed: 2.404 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.958, system: 0.061, elapsed: 12.770 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.011, elapsed: 0.261 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.733, system: 0.187, elapsed: 5.669 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.238 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.144, system: 0.212, elapsed: 1.079 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.333, system: 0.527, elapsed: 23.415 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.443, system: 0.030, elapsed: 2.105 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.994, system: 0.164, elapsed: 13.246 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.014, elapsed: 0.332 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.710, system: 0.216, elapsed: 6.121 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.273 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 10.034, system: 0.484, elapsed: 14.029 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.177, system: 0.951, elapsed: 37.182 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/111s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.571, system: 0.051, elapsed: 2.508 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.006, system: 0.084, elapsed: 13.030 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.245 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.517, system: 0.179, elapsed: 5.178 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.348 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.989, system: 0.349, elapsed: 22.093 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.574, system: 0.034, elapsed: 2.810 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.002, system: 0.067, elapsed: 13.778 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.012, elapsed: 0.286 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.599, system: 0.159, elapsed: 5.728 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.250 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.066, system: 0.298, elapsed: 23.735 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.508, system: 0.030, elapsed: 2.239 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.894, system: 0.048, elapsed: 13.079 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.010, elapsed: 0.255 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.435, system: 0.138, elapsed: 5.402 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.412 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.098, system: 0.207, elapsed: 1.430 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.923, system: 0.474, elapsed: 24.003 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.452, system: 0.032, elapsed: 2.809 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.018, system: 0.090, elapsed: 13.282 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.013, elapsed: 0.209 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.528, system: 0.204, elapsed: 4.007 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.006, elapsed: 0.186 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 10.123, system: 0.538, elapsed: 12.509 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.096, system: 0.920, elapsed: 34.019 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64