Last updated on 2026-11-01 10:54:32 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.8 | 5.06 | 46.15 | 51.21 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.2.8 | 3.23 | 35.54 | 38.77 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.2.8 | 33.61 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.2.8 | 32.23 | OK | |||
| r-devel-windows-x86_64 | 0.2.8 | 7.00 | 90.00 | 97.00 | OK | |
| r-patched-linux-x86_64 | 0.2.8 | 3.50 | 37.49 | 40.99 | OK | |
| r-release-linux-x86_64 | 0.2.8 | 4.71 | 37.60 | 42.31 | ERROR | |
| r-release-macos-arm64 | 0.2.8 | 1.00 | 23.00 | 24.00 | OK | |
| r-release-macos-x86_64 | 0.2.8 | 4.00 | 91.00 | 95.00 | OK | |
| r-release-windows-x86_64 | 0.2.8 | 8.00 | 71.00 | 79.00 | OK | |
| r-oldrel-macos-arm64 | 0.2.8 | 1.00 | 23.00 | 24.00 | OK | |
| r-oldrel-macos-x86_64 | 0.2.8 | 4.00 | 117.00 | 121.00 | OK | |
| r-oldrel-windows-x86_64 | 0.2.8 | 9.00 | 68.00 | 77.00 | OK |
Version: 0.2.8
Check: tests
Result: ERROR
Running ‘testthat.R’ [2s/64s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(geneset)
>
> test_check("geneset")
Auto download warning: downloaded length 605737 != reported length 2823223
URL: https://genekitr-china.oss-accelerate.aliyuncs.com/anno/go/mf/human_mf_geneset.fst
No valid local cache is available.
Please download manually via: https://genekitr-china.oss-accelerate.aliyuncs.com/anno/go/mf/human_mf_geneset.fst
Then save to: /home/hornik/tmp/scratch/RtmpQvTGvl/anno/go//human_mf_geneset.fst
Saving _problems/test-getGO-4.R
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 0 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-getGO.R:4:3'): getGO works ─────────────────────────────────────
Error in `read_fst(path, columns, from, to, as.data.table, old_format)`: Error opening fst file for reading, please check access rights and file availability
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-getGO.R:4:3
2. │ └─testthat::quasi_label(enquo(object), label)
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─... %>% .[[4]]
5. └─geneset::getGO(org = "human", ont = "mf", data_dir = tempdir())
6. ├─base::suppressWarnings(fst::read.fst(destfile))
7. │ └─base::withCallingHandlers(...)
8. └─fst::read.fst(destfile)
9. └─fst::read_fst(path, columns, from, to, as.data.table, old_format)
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 0 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.2.8
Check: tests
Result: ERROR
Running ‘testthat.R’ [2s/68s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(geneset)
>
> test_check("geneset")
Auto download warning: downloaded length 1007145 != reported length 2823223
URL: https://genekitr-china.oss-accelerate.aliyuncs.com/anno/go/mf/human_mf_geneset.fst
No valid local cache is available.
Please download manually via: https://genekitr-china.oss-accelerate.aliyuncs.com/anno/go/mf/human_mf_geneset.fst
Then save to: /home/hornik/tmp/scratch/RtmpY0Jxkz/anno/go//human_mf_geneset.fst
Saving _problems/test-getGO-4.R
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 0 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-getGO.R:4:3'): getGO works ─────────────────────────────────────
Error in `read_fst(path, columns, from, to, as.data.table, old_format)`: Error opening fst file for reading, please check access rights and file availability
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-getGO.R:4:3
2. │ └─testthat::quasi_label(enquo(object), label)
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─... %>% .[[4]]
5. └─geneset::getGO(org = "human", ont = "mf", data_dir = tempdir())
6. ├─base::suppressWarnings(fst::read.fst(destfile))
7. │ └─base::withCallingHandlers(...)
8. └─fst::read.fst(destfile)
9. └─fst::read_fst(path, columns, from, to, as.data.table, old_format)
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 0 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-linux-x86_64