# Index of scGate vignettes

#### M. Andreatta, Ariel J. Berenstein, S. Carmona

Currently available scGate vignettes:

1. A demo of the basic functionalities of scGate on scRNA-seq data - scGate basics

2. Purifying cells on multi-modal scATAC-seq + scRNA-seq data - scGate ATAC+RNA

3. Purifying cells on CITE-seq data - scGate CITE-seq

4. scGate to annotate scRNA-seq datasets integrated with Harmony and STACAS - scGate integrated

More information available at the scGate repository at on the related publication.