# Generated by roxygen2: do not edit by hand

export(Alpha_diversity_calculator)
export(Alpha_diversity_calculator2)
export(Deseq_analysis)
export(Deseq_analysis2)
export(Dimension_reduction)
export(Filter_function)
export(Module_abundance)
export(Module_composition)
export(NC_remove)
export(Top_taxa)
export(anova_report)
export(auto_signif_test)
export(circulation_lm)
export(color_scheme)
export(combine_and_translate)
export(community_plot)
export(compare_plot)
export(differential_bar)
export(indicator_analysis)
export(kruskal_report)
export(manhattan)
export(nc)
export(network_analysis)
export(network_analysis2)
export(network_stat)
export(network_visual)
export(network_visual_re)
export(network_withdiff)
export(object_config)
export(structure_plot)
export(sub_tax_summary)
export(t_test_report)
export(tax_summary)
export(tbRDA_analysis)
export(theme_zg)
export(volcano_plot)
export(wilcox_test_report)
import(ggplot2)
import(ggpubr)
import(igraph)
import(magrittr)
importFrom(DescTools,PostHocTest)
importFrom(HH,hov)
importFrom(Hmisc,rcorr)
importFrom(RColorBrewer,brewer.pal)
importFrom(RColorBrewer,brewer.pal.info)
importFrom(agricolae,LSD.test)
importFrom(agricolae,SNK.test)
importFrom(agricolae,scheffe.test)
importFrom(ape,pcoa)
importFrom(coin,wilcoxsign_test)
importFrom(dplyr,across)
importFrom(dplyr,everything)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(fdrtool,fdrtool)
importFrom(ggalluvial,geom_flow)
importFrom(ggplot2,aes)
importFrom(ggplot2,annotate)
importFrom(ggplot2,coord_flip)
importFrom(ggplot2,coord_polar)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_line)
importFrom(ggplot2,element_rect)
importFrom(ggplot2,element_text)
importFrom(ggplot2,facet_grid)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_area)
importFrom(ggplot2,geom_bar)
importFrom(ggplot2,geom_col)
importFrom(ggplot2,geom_errorbar)
importFrom(ggplot2,geom_hline)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_polygon)
importFrom(ggplot2,geom_segment)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,geom_vline)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,guides)
importFrom(ggplot2,labs)
importFrom(ggplot2,margin)
importFrom(ggplot2,position_dodge)
importFrom(ggplot2,position_jitter)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,scale_shape_manual)
importFrom(ggplot2,scale_x_discrete)
importFrom(ggplot2,scale_y_continuous)
importFrom(ggplot2,stat_ellipse)
importFrom(ggplot2,theme)
importFrom(ggplot2,unit)
importFrom(ggplot2,xlab)
importFrom(ggplot2,ylab)
importFrom(grDevices,colorRampPalette)
importFrom(graphics,legend)
importFrom(graphics,par)
importFrom(igraph,E)
importFrom(igraph,V)
importFrom(igraph,as.undirected)
importFrom(igraph,average.path.length)
importFrom(igraph,centralization.betweenness)
importFrom(igraph,centralization.degree)
importFrom(igraph,cluster_fast_greedy)
importFrom(igraph,degree)
importFrom(igraph,diameter)
importFrom(igraph,edge_density)
importFrom(igraph,graph_from_data_frame)
importFrom(igraph,layout_)
importFrom(igraph,membership)
importFrom(igraph,no.clusters)
importFrom(igraph,transitivity)
importFrom(igraph,with_fr)
importFrom(magrittr,"%$%")
importFrom(magrittr,"%>%")
importFrom(magrittr,"%T>%")
importFrom(multcompView,multcompLetters2)
importFrom(scales,percent)
importFrom(scales,show_col)
importFrom(stats,TukeyHSD)
importFrom(stats,aggregate)
importFrom(stats,aov)
importFrom(stats,kruskal.test)
importFrom(stats,lm)
importFrom(stats,na.omit)
importFrom(stats,p.adjust)
importFrom(stats,prcomp)
importFrom(stats,relevel)
importFrom(stats,residuals)
importFrom(stats,sd)
importFrom(stats,shapiro.test)
importFrom(stats,t.test)
importFrom(stats,wilcox.test)
importFrom(stringr,str_length)
importFrom(stringr,str_replace)
importFrom(stringr,str_replace_all)
importFrom(stringr,str_sub)
importFrom(tidyr,gather)
importFrom(tidyr,separate)
importFrom(tidyr,spread)
importFrom(utils,head)
importFrom(utils,setTxtProgressBar)
importFrom(utils,tail)
importFrom(utils,txtProgressBar)
importFrom(vegan,RsquareAdj)
importFrom(vegan,adonis2)
importFrom(vegan,anova.cca)
importFrom(vegan,decorana)
importFrom(vegan,decostand)
importFrom(vegan,estimateR)
importFrom(vegan,metaMDS)
importFrom(vegan,rda)
importFrom(vegan,scores)
importFrom(vegan,specnumber)
importFrom(vegan,vegdist)
importFrom(vegan,vif.cca)
