# R Implementation of Congruent Matching Profile Segments Method

## Documentation for package ‘cmpsR’ version 0.1.2

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package README

## Help Pages

bullets | Information of two example bullets
cmps_na_trim | Remove the leading and trailing missing values in a numeric vector
cmps_segment_plot | Plot the selected basis segment and its cross-correlation curve at all scales based on the results of CMPS algorithm
cmps_signature_plot | Plot reference signature and comparison signature based on the results of CMPS algorithm
compute_cross_corr | Wrapper function for compute_cross_corr
compute_diff_phase | Compute a Statistic for the Foreground Phase and the Background Phases
compute_score_metrics | Compute Different Metrics Based on Scores
compute_ss_ratio | #' Compute the Sum of Squares Ratio
extract_feature_cmps | Computes the CMPS score of a comparison between two bullet profiles/signatures
get_all_phases | Obtain a list of all phases of a bullet-by-bullet comparison
get_ccf4 | Function to calculate the cross-correlation between two sequences
get_ccp | Identify at most one consistent correlation peak (ccp)
get_ccr_peaks | Identify peaks of a cross correlation curve
get_CMPS | Compute the CMPS score
get_segs | Divide a bullet signature/profile into basis segments of desired length
get_seg_scale | Change the sacle of a segment
local_max_cmps | find local maximums
metric_plot_helper | Helper Function for Plotting the Distribution of a Metric
na_trim_cmps | Wrapper function for na_trim