Linear Fixed/Mixed Effects Models for Diallel Crosses

Documentation for package ‘lmDiallel’ version 1.0.1

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anova.diallel	Methods for diallel model fitting
blockMatrixDiagonal	Creates block diagonal matrix. It is used internally.
checkScheme	Utilities for fitting diallel models.
DD	Dominant Deviation effect
diallel.eff	Functions to retreive full list of genetical effects
diallelMET	Factitious dataset for Diallel analysis
emm.diallel	Utilities for fitting diallel models.
expand.diallel	Create a Data Frame from All Combinations of Parentals
G1.eff	Functions to retreive full list of genetical effects
G2.eff	Functions to retreive full list of genetical effects
G3.eff	Functions to retreive full list of genetical effects
G4.eff	Functions to retreive full list of genetical effects
GCA	General Combining Ability effect
GCAC	General Combining Ability without considering the selfed parents
GCAmis	General Combining Ability effect
GE2.eff	Functions to retreive full list of genetical effects
GE2r.eff	Functions to retreive full list of genetical effects
GE3.eff	Functions to retreive full list of genetical effects
GE3r.eff	Functions to retreive full list of genetical effects
glht.diallel	Methods for diallel model fitting
glht.diallelMod	Functions to retreive full list of genetical effects
griffing56	Griffing's dataset for diallel analysis
H.BAR	Average heterosis effect
hayman1.eff	Functions to retreive full list of genetical effects
hayman2.eff	Functions to retreive full list of genetical effects
hayman54	Hayman dataset for diallel analysis
Hi	Average heterosis effect
int.matrix	Utilities for fitting diallel models.
lm.diallel	Fitting diallel linear models
lonnquist61	Half diallel of maize dataset
matBlock	Design matrix for blocks
MDD	Mean Dominance Deviation effect
MET1.eff	Functions to retreive full list of genetical effects
MET2.eff	Functions to retreive full list of genetical effects
MET3.eff	Functions to retreive full list of genetical effects
mmer.diallel	Fitting random diallel linear models
model.matrix.diallel	Methods for diallel model fitting
model.matrixDiallel	Incidence matrices for Diallel model parametrisation
model.matrixDiallel.MET	Incidence matrices for Diallel model parametrisation
predict.diallel	Methods for diallel model fitting
REC	Reciprocal Effect not parted into RGCA and RSCA
REC.G3	Reciprocal Effect not parted into RGCA and RSCA
RGCA	Reciprocal General Combining Ability
RSCA	Reciprocal Specific Combining Ability
SCA	Specific Combining Ability
SCA.G3	Specific Combining Ability
SCA.GE	Specific Combining Ability
SCAmis	Specific Combining Ability
SP	Selfed Parents effect
summary.diallel	Methods for diallel model fitting
tSCA	Total Specific Combining Ability
vcov.diallel	Methods for diallel model fitting
VEi	Variety Effect
zhang05	Data for diallel analysis from Zhang (2005)