Bayesian Inference of Boolean Genetic Networks

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Documentation for package ‘BBNI’ version 0.2.3

• DESCRIPTION file
• User guides, package vignettes and other documentation
• Package NEWS
• Package README

Help Pages

bbni_class	BBNI MCMC Output Class
GenerateNetwork	Generate Initial Network Topology
GenerateSample	Simulate Boolean Network Observation Dataset
plot.bbni	Plot a BBNI MCMC Object
plot_bbni	Plot the Inferred Bayesian Boolean Network
plot_network	Plot a Single Boolean Network
plot_trace	Plot MCMC Trace for BBNI
print.bbni	Print a BBNI MCMC Object
run_bbni	Execute Metropolis-within-Gibbs MCMC Sampler for Boolean Networks
summary.bbni	Posterior Summary of a BBNI MCMC Object
yeast_data	Yeast Cell-Cycle Gene Expression Data