# Geometric Analysis of Configurations in High-Dimensional Spaces

## Documentation for package ‘AMDconfigurations’ version 0.1.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package README

## Help Pages

assign_configurations | Fuzzy c-means clustering with multiple random initializations
compute_amd_curve | Compute the Average Membership Degree (AMD) curve
estimate_sigma_equivalent | Estimate the sigma-equivalent value from an AMD curve
Fulldata | Ecological dataset used in the example
plot.amd_curve | Plot method for AMD curve objects
plot.amd_sigma | Plot method for sigma-equivalent objects
plot_AMD | Plot the AMD curve
print.amd_curve | Print method for AMD curve objects
print.amd_sigma | Print method for sigma-equivalent objects
summary.amd_curve | Summary method for AMD curve objects
summary.amd_sigma | Summary method for sigma-equivalent objects
summary.sigma_equivalent | Summary method for sigma_equivalent objects
Transcdata_small | Reduced transcriptomic dataset (1000 variables)