Genotype-by-Environment Interaction and Yield Stability Analysis
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Documentation for package ‘stability’ version 1.0.0
Help Pages
| add_anova | Combined analysis of variance of a multi-environment trial |
| add_anova.default | Combined analysis of variance of a multi-environment trial |
| ammi | Additive main effects and multiplicative interaction (AMMI) analysis |
| ammi.default | Additive main effects and multiplicative interaction (AMMI) analysis |
| ammi_biplot | AMMI biplots |
| ammi_biplot.default | AMMI biplots |
| as.data.frame.stab_result | Methods for stability results |
| as.data.table.stab_result | Methods for stability results |
| er_anova | Eberhart and Russell's analysis of stability |
| er_anova.default | Eberhart and Russell's analysis of stability |
| format.stab_interpretation | Interpretation of a stability analysis |
| format.stab_result | Methods for stability results |
| ge_data | Multi-environment trial of 60 wheat genotypes in 11 environments |
| ge_effects | Interaction effects and genotype-plus-interaction effects |
| ge_effects.default | Interaction effects and genotype-plus-interaction effects |
| ge_means | Genotype-by-environment means and rankings |
| ge_means.default | Genotype-by-environment means and rankings |
| gge_biplot | GGE biplot |
| gge_biplot.default | GGE biplot |
| indiv_anova | Analysis of variance in each environment |
| indiv_anova.default | Analysis of variance in each environment |
| plot.stab_result | Methods for stability results |
| print.stab_interpretation | Interpretation of a stability analysis |
| print.stab_result | Methods for stability results |
| print.summary.stab_result | Methods for stability results |
| stab-methods | Methods for stability results |
| stab_asv | AMMI stability value and yield stability index |
| stab_asv.default | AMMI stability value and yield stability index |
| stab_dist | AMMI stability distance |
| stab_dist.default | AMMI stability distance |
| stab_eskridge | Eskridge's safety-first selection indices |
| stab_eskridge.default | Eskridge's safety-first selection indices |
| stab_fox | Fox's top-third ranking |
| stab_fox.default | Fox's top-third ranking |
| stab_huehn | Huehn's nonparametric stability statistics |
| stab_huehn.default | Huehn's nonparametric stability statistics |
| stab_interpret | Interpretation of a stability analysis |
| stab_kang | Kang's rank-sum of yield and stability variance |
| stab_kang.default | Kang's rank-sum of yield and stability variance |
| stab_masv | Modified AMMI stability value |
| stab_masv.default | Modified AMMI stability value |
| stab_measures | Variance-based stability measures: environmental variance, ecovalence and stability variance |
| stab_measures.default | Variance-based stability measures: environmental variance, ecovalence and stability variance |
| stab_notation | Notation of stability |
| stab_par | Stability parameters with Shukla's tests and Kang's yield-stability statistic |
| stab_par.default | Stability parameters with Shukla's tests and Kang's yield-stability statistic |
| stab_reference | Published values used by the tests and vignettes |
| stab_reg | Finlay and Wilkinson's regression of each genotype on the environment index |
| stab_reg.default | Finlay and Wilkinson's regression of each genotype on the environment index |
| stab_reliability | Annicchiarico's reliability index |
| stab_reliability.default | Annicchiarico's reliability index |
| stab_save | Save a figure (vector PDF by default) |
| stab_superiority | Lin and Binns' superiority measure |
| stab_superiority.default | Lin and Binns' superiority measure |
| stab_theme | ggplot2 theme of stability |
| summary.stab_result | Methods for stability results |