add_peak_labels	add_peak_labels
add_plot_title	add_plot_title
bar_plots	bar_plots
base_mm	base_mm
catalog_and_label_order_476	catalog_and_label_order_476
catalog_row_order	catalog_row_order
check_ylim	check_ylim
detect_y_axis_type	detect_y_axis_type
heatmap_plots	heatmap_plots
id89_figlabels	id89_figlabels
normalize_catalog	normalize_catalog
order_DBS136_for_plotting	order_DBS136_for_plotting
plot_catalog_pdf	plot_catalog_pdf
plot_DBS136	heatmap_plots
plot_DBS136_pdf	heatmap_plots
plot_DBS144	bar_plots
plot_DBS144_pdf	bar_plots
plot_DBS78	bar_plots
plot_DBS78_pdf	bar_plots
plot_guess	plot_guess
plot_guess_pdf	plot_guess
plot_helpers	plot_helpers
plot_ID166	bar_plots
plot_ID166_pdf	bar_plots
plot_ID476	bar_plots
plot_ID476_pdf	bar_plots
plot_ID476_right	bar_plots
plot_ID476_right_pdf	bar_plots
plot_ID83	bar_plots
plot_ID83_pdf	bar_plots
plot_ID89	bar_plots
plot_ID89_pdf	bar_plots
plot_SBS12	bar_plots
plot_SBS12_pdf	bar_plots
plot_SBS1536	heatmap_plots
plot_SBS1536_pdf	heatmap_plots
plot_SBS192	bar_plots
plot_SBS192_pdf	bar_plots
plot_SBS288	bar_plots
plot_SBS288_pdf	bar_plots
plot_SBS96	bar_plots
plot_SBS96_pdf	bar_plots
prepare_indel_data	prepare_indel_data
reorder_DBS144_for_plotting	reorder_DBS144_for_plotting
reorder_SBS192_for_plotting	reorder_SBS192_for_plotting
resolve_show_counts	resolve_show_counts
unstaple_SBS96_rownames	unstaple_SBS96_rownames
