Framework for Tick Population and Infection Modeling

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Documentation for package ‘IxPopDyMod’ version 0.3.0

• DESCRIPTION file.
• Package NEWS.

Help Pages

annual_growth_rate	Calculate annual growth rate
config	Create a 'config' object
config_ex_1	Simple model configuration example
config_ex_2	Simple model configuration example using delays
constant_fun	Constant function
density_fun	Density dependent mortality
expo_fun	Exponential function
feed_fun	Probability of actively questing and then finding a host
find_n_feed	Probability of finding a host and successfully feeding on it
format.predictor_spec	Format a 'predictor_spec'
get_pred_from_table	Get a predictor from input data
growth_rate	Calculate multiplicative growth rate of population
host_example_config	Configuration for showing how we can modify host community data
infect_example_config	Configuration for showing infection dynamics
infect_fun	Probability that a feeding tick becomes engorged infected or uninfected
life_cycle	Create a 'life_cycle' from a collection of 'transition's
new_transition_function	Constructor for transition functions
ogden2005	Configuration for Ixodes scapularis population dynamics model from Ogden et al. 2005
ogden_feed_fun	Probability of actively questing times constant host finding probability
parameters	Create a set of parameters
predictors	Create a table of 'predictors'
predictor_spec	Specify how a single predictor should be used
print.predictor_spec	Print a 'predictor_spec'
print.transition	Print a transition
run	Run the model
snow_cover_fun	Mortality as a function of whether there is a snow on the ground
temp_example_config	Configuration for showing how we can modify climate data
transition	Create a 'transition' object
winter_tick	Configuration for winter tick population dynamics model