| AccumulateNormal | SubtypeDrug internal function |
| CalculateSES | SubtypeDrug internal function |
| Colork | Color |
| Disease_drugs | Simulated result data |
| Drugs_CID | Correspondence table of drug label and drug ID in PubCham database |
| Geneexp | Simulated gene expression data |
| GeneexpT | Gene expression data for testing |
| getDrugMatrix | SubtypeDrug internal function |
| getDrugSpw | SubtypeDrug internal function |
| getDrugStructure | Get drug chemical structure diagram data |
| isPackageLoaded | SubtypeDrug internal function |
| plotDScoreHeatmap | Plot a heat map of the normalized drug-disease reverse association scores for cancer samples |
| plotDSpwHeatmap | Plot heat map of the drug regulated subpathway activity score |
| plotGlobalGraph | Plot a global graph of the drug |
| plotSpwNetGraph | Polt a subpathway network graph |
| PrioSubtypeDrug | Prioritization of candidate cancer subtype-specific drugs (PrioSubtypeDrug) |
| ReadClsFile | SubtypeDrug internal function |
| SpwNetworkData | Subpathway network structure data |
| Subtype_drugs | Simulation result data |
| UserDS | Simulated user-defined drug regulator subpathway dataset |
| UserDST | User-defined drug regulator subpathway dataset for testing |
| UserGS | Simulated user-defined gene set data |
| UserGST | User-defined gene set data for testing |